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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs3818510 chr9:130704975 T/C 9.03E-5 501 1.8 29.1 38 KM Plot
KIRC rs3840932 chr19:46366371 TCCG/T 1.08E-7 500 38.83 28.17 1.77 KM Plot
KIRC rs3897402 chr10:104705412 C/T 7.68E-5 509 34.47 41.27 28.03 KM Plot
KIRC rs3914885 chr4:107843946 A/C 0.000119 508 37.73 29.5 12.5 KM Plot
KIRC rs3920862 chr11:34795679 A/T 9.5E-8 504 37.53 33.35 3.3 KM Plot
KIRC rs398357 chr16:23629617 A/C 1.39E-8 504 37.47 37.47 1.62 KM Plot
KIRC rs4085481 chr16:23622667 T/C 1.28E-8 504 37.47 37.47 1.62 KM Plot
KIRC rs4130522 chr3:48352313 G/A 7.7E-6 505 37.6 37.77 19.13 KM Plot
KIRC rs4236040 chr6:25761209 T/C 7.39E-6 506 6.8 33.82 37.73 KM Plot
KIRC rs4242818 chr11:1516812 C/T 9.0E-5 505 5.47 37.37 37.33 KM Plot
KIRC rs425629 chr16:23628507 A/C 1.28E-8 504 37.47 37.47 1.62 KM Plot
KIRC rs4274583 chr2:67538600 A/G 1.77E-7 507 37.37 37.7 2.03 KM Plot
KIRC rs4297775 chr18:33226280 C/A 3.23E-5 509 37.75 31.77 7.37 KM Plot
KIRC rs4336952 chr10:117674244 G/T 4.91E-7 509 37.95 20 22.15 KM Plot
KIRC rs4371540 chr3:48353543 G/A 7.21E-6 505 37.53 37.77 19.13 KM Plot